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On this page

  •   Scientific writing
    • Templates (Latex & Beamer)
    • General tips and tools
  •   Correspondance
  •   Codes
    • dolfin_mech (Genet et al. 2023)
    • dolfin_warp (Genet 2023)
    • NeuROM (Daby-Seesaram, Skardova, and Genet 2024)

Additional resources

  Scientific writing

Templates (Latex & Beamer)

  • The PhD template is for writting a PhD thesis with a separate title page. This template aims at setting up all the necessary packages and create the base outline of a thesis.
  • The beamer template is for presentations with an LMS-based style and exemples.

PhD Template

Beamer

General tips and tools

  • The package microtype helps improving the rendering of long text easily
  • Quarto is an open-source librairy that enables to create dynamic scientific documents, presentations, and websites using Markdown, LaTeX, and a variety of programming languages (including python, R, etc.).
    • The html presentations can then be translated into pdfs using decktape.
      • install node brew install node
      • install decktape npm install -g decktape
      • reveal --size=1600x1000 presentation.html presentation.pdf
  • Good practices regarding figure formating
    • Colour science (Crameri, Shephard, and Heron 2020) and colour map choices
    • 10 rules for better figures in scientific writting (Rougier, Droettboom, and Bourne 2014)
    • Nice tool for plotting data in latex: PGFplot

  Correspondance

Cover letter

Here is a template for cover letters using a Polytechnique letter format.

  Codes

dolfin_mech (Genet et al. 2023)

PyPI Downloads DOI

A set of FEniCS-based python tools for Computational Mechanics.

dolfin_warp (Genet 2023)

PyPI Downloads DOI

A set of FEniCS- and VTK-based python tools for Finite Element Digital Image Correlation/Image Registration/Motion Tracking.

NeuROM (Daby-Seesaram, Skardova, and Genet 2024)

PyPI Downloads GitHub license DOI

A reduced-order modelling code used to create surrogate models based on an hybridisation of standard reduced-order modelling methods such as the PGD and Deep learning methods is public and notebooks with tutorials are also available.

References

Crameri, Fabio, Grace E. Shephard, and Philip J. Heron. 2020. “The Misuse of Colour in Science Communication.” Nature Communications 11 (1): 5444. https://doi.org/10.1038/s41467-020-19160-7.
Daby-Seesaram, A., K. Skardova, and M. Genet. 2024. “NeuROM.” Zenodo. https://doi.org/10.5281/zenodo.13772741 .
Genet, M. 2023. “dolfin_warp.” Zenodo. https://doi.org/10.5281/zenodo.8010786 .
Genet, M., C. Patte, M. Manoochehrtayebi, and A. Peyraut. 2023. “dolfin_mech.” Zenodo. https://doi.org/10.5281/zenodo.10533833 .
Rougier, Nicolas P., Michael Droettboom, and Philip E. Bourne. 2014. “Ten Simple Rules for Better Figures.” PLOS Computational Biology 10 (9): e1003833. https://doi.org/10.1371/journal.pcbi.1003833.